Volume 12 Issue 1
Feb.  2022
Turn off MathJax
Article Contents
Huixia Zhang, Yan Li, Zheng Li, Christopher Wai-Kei Lam, Peng Zhu, Caiyun Wang, Hua Zhou, Wei Zhang. MTBSTFA derivatization-LC-MS/MS approach for the quantitative analysis of endogenous nucleotides in human colorectal carcinoma cells[J]. Journal of Pharmaceutical Analysis, 2022, 12(1): 77-86. doi: 10.1016/j.jpha.2021.01.001
Citation: Huixia Zhang, Yan Li, Zheng Li, Christopher Wai-Kei Lam, Peng Zhu, Caiyun Wang, Hua Zhou, Wei Zhang. MTBSTFA derivatization-LC-MS/MS approach for the quantitative analysis of endogenous nucleotides in human colorectal carcinoma cells[J]. Journal of Pharmaceutical Analysis, 2022, 12(1): 77-86. doi: 10.1016/j.jpha.2021.01.001

MTBSTFA derivatization-LC-MS/MS approach for the quantitative analysis of endogenous nucleotides in human colorectal carcinoma cells

doi: 10.1016/j.jpha.2021.01.001
Funds:

This work was supported by Science and Technology Development Fund, Macau SAR (File Nos.: 0052/2018/A2 and 0077/2019/A2) and the National Natural Science Foundation of China (Grant No.: 61827819).

  • Received Date: Jun. 07, 2020
  • Accepted Date: Jan. 14, 2021
  • Rev Recd Date: Oct. 28, 2020
  • Publish Date: Jan. 22, 2021
  • Endogenous ribonucleotides (RNs) and deoxyribonucleotides (dRNs) are important metabolites related to the pathogenesis of many diseases. In light of their physiological and pathological significances, a novel and sensitive pre-column derivatization method with N-(t-butyldimethylsilyl)-N-methyltrifluoroacetamide (MTBSTFA) was developed to determine RNs and dRNs in human cells using high-performance liquid chromatography tandem mass spectrometry (HPLC-MS/MS). A one-step extraction of cells with 85% methanol followed by a simple derivatization reaction within 5 min at room temperature contributed to shortened analysis time. The derivatives of 22 nucleoside mono-, di- and triphosphates were retained on the typical C18 column and eluted by ammonium acetate and acetonitrile in 9 min. Under these optimal conditions, good linearity was achieved in the tested calibration ranges. The lower limit of quantitation (LLOQ) was determined to be 0.1–0.4  μM for the tested RNs and 0.001–0.1  μM for dRNs. In addition, the precision (CV) was <15% and the RSD of stability was lower than 10.4%. Furthermore, this method was applied to quantify the endogenous nucleotides in human colorectal carcinoma cell lines HCT 116 exposed to 10-hydroxycamptothecin. In conclusion, our method has proven to be simple, rapid, sensitive, and reliable. It may be used for specific expanded studies on intracellular pharmacology in vitro.
  • loading
  • M. Fasullo, L. Endres, Nucleotide salvage deficiencies, DNA damage and neurodegeneration, Int. J. Mol. Sci. 16(2015)9431-9449
    H. Gad, T. Koolmeister, A.S. Jemth, et al., MTH1 inhibition eradicates cancer by preventing sanitation of the dNTP pool, Nature 508(2014)215-221
    A. Suomalainen, B.J. Battersby, Mitochondrial diseases:the contribution of organelle stress responses to pathology, Nat. Rev. Mol. Cell Biol. 19(2018)77-92
    A.K. Berglund, C. Navarrete, M.K. Engqvist, et al., Nucleotide pools dictate the identity and frequency of ribonucleotide incorporation in mitochondrial DNA, Plos Genet. 13(2017) e1006628
    A. Spiegel, Signal transduction by guanine nucleotide binding proteins, Mol. and Cell. Endocrinol. 49(1987)1-16
    B.B. Kahn, T. Alquier, D. Carling, et al., AMP-activated protein kinase:Ancient energy gauge provides clues to modern understanding of metabolism, Cell Metab. 1(2005)15-25
    D. Garcia, R.J. Shaw, AMPK:mechanisms of cellular energy sensing and restoration of metabolic balance, Molecular Cell 66(2017)789-800
    Z. Kong, S.D. Jia, A.L. Chabes, et al., Simultaneous determination of ribonucleoside and deoxyribonucleoside triphosphates in biological samples by hydrophilic interaction liquid chromatography coupled with tandem mass spectrometry, Nucleic Acids Res. 46(2018) e66
    E.M. Piall, G.W. Aherne, V. Marks, The quantitative determination of 2'-deoxycytidine-5'-triphosphate in cell extracts by radioimmunoassay, Ana. Biochem. 154(1986)276-281
    Y. Huo, L. Qi, X.J. Lv, et al., A sensitive aptasensor for colorimetric detection of adenosine triphosphate based on the protective effect of ATP-aptamer complexes on unmodified gold nanoparticles, Biosens. Bioelectron. 78(2016)315-320
    Y. Guo, S. Li, J. Liu, et al., Double functional aptamer switch probes based on gold nanorods for intracellular ATP detection and targeted drugs transportation, Sensors Actuat. B:Chem. 235(2016)655-662
    M. Mateos-Vivas, J. Dominguez-Alvarez, E. Rodriguez-Gonzalo, et al., Capillary electrophoresis coupled to mass spectrometry employing hexafluoro-2-propanol for the determination of nucleosides and nucleotide mono-, di-and tri-phosphates in baby foods, Food Chem. 233(2017)38-44
    C. Zhao, Y. Yang, L. Wei, et al., Simultaneous determination of intracellular nucleotides and coenzymes in Yarrowia lipolytica producing lipid and lycopene by capillary zone electrophoresis, J. Chromatogr. A 1514(2017)120-126
    A.H. Rageh, U. Pyell, Imidazolium-based ionic liquid-type surfactant as pseu-dostationary phase in micellar electrokinetic chromatography of highly hydrophilic urinary nucleosides, J. Chromatogr. A 1316(2013)135-146
    E. Fromentin, C. Gavegnano, A. Obikhod, et al., Simultaneous quantification of intracellular natural and antiretroviral nucleosides and nucleotides by liquid chromatography-tandem mass spectrometry, Anal. Chem. 82(2010)1982-1989
    T. Kamceva, T. Bjanes, A. Svardal, et al., Liquid chromatography/tandem mass spectrometry method for simultaneous quantification of eight endogenous nucleotides and the intracellular gemcitabine metabolite dFdCTP in human peripheral blood mononuclear cells, J. Chromatogr. B 1001(2015)212-220
    G. Zhang, A.D. Walker, Z. Lin, et al., Strategies for quantitation of endogenous adenine nucleotides in human plasma using novel ion-pair hydrophilic interaction chromatography coupled with tandem mass spectrometry, J. Chromatogr. A 1325(2014)129-136
    N.L. Padivitage, M.K. Dissanayake, D.W. Armstrong, Separation of nucleotides by hydrophilic interaction chromatography using the FRULIC-N column, Anal. Bioanal. Chem. 405(2013)8837-8848
    K. Inoue, R. Obara, T. Hino, et al., Development and application of an HILIC-MS/MS method for the quantitation of nucleotides in infant formula, J. Agric. Food Chem. 58(2010)9918-9924
    E. Johnsen, S. R. Wilson, I. Odsbu, et al., Hydrophilic interaction chromatography of nucleoside triphosphates with temperature as a separation parameter, J. Chromatogr. A 1218(2011)5981-5986
    J.M. Halket, V.G. Zaikin, Derivatization in mass spectrometry-1. Silylation, Eur. J. Mass Spectrom. 9(2003)1-21
    L. Zhang, H. Zhang, J. Wang, et al., Determination of trace level of cAMP in Locusta migratoria manilensis Meyen by HPLC with fluorescence derivation, Int. J. Mol. Sci. 7(2006)266-273
    A. Nordstrom, P. Tarkowski, D. Tarkowska, et al., Derivatization for LC-electrospray ionization-MS:a tool for improving reversed-phase separation and ESI responses of bases, ribosides, and intact nucleotides, Anal. Chem. 76(2004)2869-2877
    J. Flarakos, W. Xiong, J. Glick, et al., A deoxynucleotide derivatization methodology for improving LC-ESI-MS detection, Anal. Chem. 77(2005)2373-2380
    H.X. Zhang, Y. Li, Z. Li, etal., Rapid and sensitive determination of four bisphosphonates in rat plasma after MTBSTFA derivatization using liquid chromatography-mass spectrometry, J. Pharm. Biomed. Anal. 190(2020)113579
    B. Zhu, H. Wei, Q. Wang, et al., A simultaneously quantitative method to profiling twenty endogenous nucleosides and nucleotides in cancer cells using UHPLC-MS/MS, Talanta 179(2018)615-623
    C. Hellmuth, M. Weber, B. Koletzko, et al., Nonesterified fatty acid determination for functional lipidomics:comprehensive ultrahigh performance liquid chromatography-tandem mass spectrometry quantitation, qualification, and parameter prediction, Anal. Chem. 84(2012)1483-1490
    U.S. Department of Health and Human Services, Food and Drug Administration, Guidance for Industry, Bioanalytical Method Validation, 2018, May 2018, https://www.fda.gov/regulatory-information/search-fdaguidance-documents/ioanalytical-method-validation-guidance-industry
    F.B. Rudolph, The biochemistry and physiology of nucleotides. J. Nutrition 124(1994)124S-127S
    C. Schummer, O. Delhomme, B.M. Appenzeller, et al., Comparison of MTBSTFA and BSTFA in derivatization reactions of polar compounds prior to GC/MS analysis, Talanta 77(2009)1473-1482
    H.G. Mol, S. Sunarto, O.M. Steijger, Determination of endocrine disruptors in water after derivatization with N-methyl-N-(tert.-butyldimethyltrifluoroacetamide) using gas chromatography with mass spectrometric detection, J. Chromatogr. A 879(2000)97-112
    H.Y. Zhang, P.P. Zhang, X.X. Tan, et al., Derivatization method for the quantification of lactic acid in cell culture media via gas chromatography and applications in the study of cell glycometabolism, J. Chromatogr. B 1090(2018)1-6
    T.G. Sobolevsky, A.I. Revelsky, B. Miller, et al., Comparison of silylation and esterification/acylation procedures in GC-MS analysis of amino acids, J. Sep. Sci. 26(2003)1474-1478
    S. Cohen, L.P. Jordheim, M. Megherbi, et al., Liquid chromatographic methods for the determination of endogenous nucleotides and nucleotide analogs used in cancer therapy:a review, J. Chromatogr. B 878(2010)1912-1928
    C. Polson, P. Sarkar, B. Incledon, et al., Optimization of protein precipitation based upon effectiveness of protein removal and ionization effect in liquid chromatography-tandem mass spectrometry, J. Chromatogr. B 785(2003)263-275
    R. Kuskovsky, R. Buj, P. Xu, et al., Simultaneous isotope dilution quantification and metabolic tracing of deoxyribonucleotides by liquid chromatography high resolution mass spectrometry, Anal. Biochem. 568(2019)65-72
    S.L. Shao, W.W. Zhang, W. Zhao, et al., Apoptosis of human leukemia cell line K562 cells induced by hydroxycamptothecine, Adv. Materials Res. 535(2012)2420-2424
    B. Liu, J. Grosshans, The role of dNTP metabolites in control of the embryonic cell cycle, Cell Cycle 18(2019)2817-2827
    C.K. Mathews, DNA precursor metabolism and genomic stability, FASEB J. 20(2006)1300-1314
    B. Yousefi, N. Samadi, Y. Ahmadi, Akt and p53R2, partners that dictate the progression and invasiveness of cancer, DNA repair 22(2014)24-29
    Y. Engstrom, S. Eriksson, I. Jildevik, et al., Cell cycle-dependent expression of mammalian ribonucleotide reductase. Differential regulation of the two subunits, J. Biol. Chem. 260(1985)9114-9116
  • 加载中

Catalog

    通讯作者: 陈斌, bchen63@163.com
    • 1. 

      沈阳化工大学材料科学与工程学院 沈阳 110142

    1. 本站搜索
    2. 百度学术搜索
    3. 万方数据库搜索
    4. CNKI搜索

    Figures(1)

    Article Metrics

    Article views (197) PDF downloads(9) Cited by()
    Proportional views
    Related

    /

    DownLoad:  Full-Size Img  PowerPoint
    Return
    Return